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    <title>Ramblings of a Geologist</title>
    <link>http://blog.case.edu/katherine.allen/</link>
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    <pubDate>Fri, 28 Mar 2008 01:57:51 EST</pubDate>
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      <title>How to unscrew a planet?</title>
      <link>http://blog.case.edu/katherine.allen/2008/03/28/how_to_unscrew_a_planet</link>
      <description>How many world leaders does it take to unscrew a light bulb? How about to unscrew a planet? This week,...</description>
      <guid>http://blog.case.edu/katherine.allen/2008/03/28/how_to_unscrew_a_planet</guid>
      
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      <category domain="http://www.case.edu">Case Western Reserve University</category>
	  <pubDate>Fri, 28 Mar 2008 01:57:51 EST</pubDate>
      <content:encoded><![CDATA[<p>How many world leaders does it take to unscrew a light bulb?  How about to unscrew a planet?  </p>

<p>This week, Columbia University is hosting the fifth "State of the Planet" conference.  Participants included UN visionaries like former UN Secretary General Kofi Annan as well as voices from the World Bank, corporations, and academia.  I arrived early, fortified with coffee, and managed to sit near the front to witness both the clash and collaboration that sparked between these giants.</p>

<p>I was both inspired and frustrated by the discussions.  Crucial issues were addressed:  Poverty, Conflict, Health, Resource Management in the face of Climate Change.  Big Problems met with Big Ideas.  (I don't know how to convey the absolutely charged atmosphere, and emphasis on the importance of every word, except to capitalize.)  Examples were given of both soaring successes and abysmal failures in aid to poor regions, especially Africa.  The overall consensus seemed to be that definite progress is being made to improve health and sustainable growth, but that current efforts are not nearly enough.  John McArthur of Columbia's Earth Institute, among others, repeatedly called for conversion of empty commitments to actions.  McArthur further emphasized the massive difference that can be made by basic aid -- putting simple, fundamental tools "in the hands of those who need them."  Food hand-outs were dismissed as temporary solutions, and the goal of jump-starting real growth from inside communities and within national infrastructures echoed throughout the day.  </p>

<p>Many moments, I found myself absolutely on fire with hope.  International conversations like these -- held under the conference's banner of "Real People, Real Places, Real Solutions" -- make possible truly international action.  Also, the work of Jeff Sachs and other passionate advocates for positive change renewed my faith in the powers of reason and compassion, and reminded me that power itself does not necessarily eradicate those qualities from the hearts of those with influence.  However.  I was disturbed by The Economist's evening debate, weighing arguments for and against the proposition that "The United States will solve the climate change problem."  (If you guffawed at the statement, you are not alone.  70% of the audience raised their hands firmly in the "Con" camp before the debate even began, myself included).  </p>

<p>My concern is not with the statement, but with the climate problem misconceptions held by the debaters themselves!  </p>

<p>FIRST:  In this debate, the solution to "the climate change problem" was defined (implicitly) as simply creating cheap energy sources and decreasing the rate of atmospheric CO2 rise.  Period, end of story.  I had to tie my hands up in my scarf and take very deep and methodical breaths to keep from screaming "WHAT ABOUT EVERYTHING ELSE???"  Don't get me wrong, I agree that carbon-budgeting, emissions reductions, and sustainable energy are absolutely crucial.  Fundamental, in fact, to environmental health and the future of humanity.  BUT.  Their blatant disregard of issues such as deforestation and population was extremely short-sighted.  Even in the 1980s, deforestation accounted for almost 20% of carbon emissions, and has been a growing problem.  Ignorance of the TOTAL inputs and outputs of atmospheric CO2, and blindness towards the science behind our understanding of these fluxes, is fatal.  Just as the net CO2-reduction from using many crop-based biofuels is now being slashed by research that finally takes into account the Big Picture (specifically,  deforestation due to development of crop-fuels in tropical regions), these plans and "fixes" for this problem are doomed without a solid understanding of the WHOLE carbon cycle.  Not to mention other greenhouse gases like methane.  Policy and technology absolutely cannot ignore the complexity of the problem if we want to have any prayer at creating an effective response.  ALSO -- the panel's complete neglect of the need to deal with IMPACTS of climate change as part of the solution was flat-out offensive.  After all the insightful and urgent discussion during the day, I was taken aback.  If the "climate change problem" is defined simply as an atmosphere and energy book-balancing problem, we are in big, big trouble.  The potential benefits of lifestyle change (addressing the CONSUMPTION side of the carbon coin) were not mentioned either.  Surely if the US is one of the greatest emitters, the Great Wasters of Resource, we have the largest capacity to make a difference by cutting back.  </p>

<p>SECOND:  Using the word "solution" can be dangerous.  It implies and end-point, a finish-line.  Concrete, quantifiable goals are crucial -- of course! -- and setting limits on "carbon-costs" and CO2 ceilings  is a necessary first step.  BUT THIS IS A DYNAMIC PROBLEM, AND REQUIRES A DYNAMIC SOLUTION.  Even if we reduce emissions, even if we manage to level off, we have ALREADY pushed the system far from equilibrium.  I dedicate most of the hours in my day to understanding the climate system, and work with some of the sharpest minds in Earth Science.  Despite heroic and olympian efforts across the globe, the scientific community can not predict the future with absolute certainty.  However, we DO know that the system can change, and change FAST in response to the kinds of pressures civilization is exerting on the Earth.  I am positive that if a solution to climate change is to be successful, it must be fully equipped to deal with rapid change -- appropriate adjustment of prices, infrastructure, and emissions standards at extremely short notice, coupled with a willingness to enforce completely new strategies should the need arise.  We need a well-prepared group, perhaps a sort of mitigation militia, that has both the structure and the influence to deal with changes and problems as they arise -- creation of such a means of response needs to enter the conversation.  This is not something we can fix with a wave of a magic technological device such as those hypothesized by Vinod Khosla, but is a problem we may have to parry for centuries.  </p>

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      <title>Lake Tanganyika, Africa</title>
      <link>http://blog.case.edu/katherine.allen/2006/05/24/lake_tanganyika_africa</link>
      <description>In 34 days I will be stepping on a plane to Africa. Lightweight clothes, sunscreen, science books &amp; relevant articles,...</description>
      <guid>http://blog.case.edu/katherine.allen/2006/05/24/lake_tanganyika_africa</guid>
      
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	  <pubDate>Wed, 24 May 2006 18:45:29 EST</pubDate>
      <content:encoded><![CDATA[<p>In 34 days I will be stepping on a plane to Africa.  Lightweight clothes, sunscreen, science books & relevant articles, camera, journal, malaria pills, and a really big hat ... I can't wait.</p>

<p>I've been thinking some more about my Nyanza project, and I may end up focusing more on the effects of deforestation than on climate change (although I suspect the two are, inevitably, related).  Over the past 200 years, the northern part of Lake Tanganyika has been almost completely deforested.  Runoff and erosion have increased, dumping sediment and excess nutrients into the lake.  Since fish from Tanganyika supply almost half of the local population's protein needs, everyone is very concerned about lake health and productivity.  </p>

<p>We will probably measure organic matter abundance over time to reconstruct productivity history, and look at sediment samples under a microscope to see how its composition and mineralogy change.  Shifts in mineralogy can sometimes indicate a change in sediment source, and could help us understand how deforestation has altered erosion and transport in the region.  </p>

<p>Fish depend on phytoplankton and other organisms in the water column, who in turn are strongly affected by sunlight and nutrient supply.  Erosion can impact both:  large amounts of fine-grained material can cloud lake waters, decreasing light penetration, and nitrogen and phosphorus washed from land (especially farmland) can cause algae blooms, etc.  If we can compare changes in lake productivity and sediment type with the region's deforestation history over the past 200 years, then we might be better able to understand the relationship between land use change and lake health.  </p>]]></content:encoded>
	  
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      <title>The Stable Isotope Story</title>
      <link>http://blog.case.edu/katherine.allen/2006/05/03/the_stable_isotope_story</link>
      <description>I am now pretty convinced that climatic warming caused the whitings (calcite precipitation events) we see in Lake Erie! What...</description>
      <guid>http://blog.case.edu/katherine.allen/2006/05/03/the_stable_isotope_story</guid>
      
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	  <pubDate>Wed, 03 May 2006 21:09:39 EST</pubDate>
      <content:encoded><![CDATA[<p>I am now pretty convinced that <strong>climatic warming </strong>caused the whitings (calcite precipitation events) we see in Lake Erie!  What made up my mind?  And why should anybody care?</p>

<p>Stable isotope data was the key.  It indicated that there were high levels of evaporation, high calcite precipitation rates, and high primary productivity.  </p>

<p>Hold on -- what's a stable isotope?  Good question, I'm glad you asked.  Isotopes are "varieties" of elements:  they all have the same number of protons, but a different number of neutrons.  This means they behave almost the same, but not quite.  Since they have different numbers of neutrons, isotopes have slightly different masses.  This means that lighter isotopes will tend to evaporate more easily, and be preferred by organisms for use in photosynthesis, etc.  For example, if lots of light oxygen isotopes are evaporating, then more heavy isotopes get left behind, making the water "heavier."  We can measure the stable isotope composition of different materials (in this case, mud and shells) and compare it to an international standard to get a ratio.  This ratio can help us figure out what was happening in the environment at the time!</p>

<p>It sounds like a bit of a stretch, I know.  And it is true that different factors can cause the same change in an isotopic composition -- oxygen isotopic composition of lake water could be made really heavy by lots of evaporation, OR also by an influx of heavy water from another lake, or from precipitation, or groundwater ... so how do we know?  Well, we can never really KNOW 100% (one of the frustrating things about trying to understand the past), but we can make a very good guess.  It all comes back to that multi-proxy approach I was talking about in earlier entries.  We use LOTS of variables, combined, to make a complete picture.  Put it all together, and see what makes the most sense.</p>

<p>Before I tell the Lake Erie isotopes story, one more piece of background:</p>

<p>We measured stable isotopes on two materials:  mud and shells.  The shells were made by fingernail clams, which are benthic organisms (ie, they live on the lake floor).  The mud is not so easy to source, but since it was very fine-grained and calcitic, we had a hunch that it was precipitated out of the lake's upper waters (the fancy geologic word for this water layer is the "epilimnion."  use it at a party, your friends will be impressed).  Thus, we expect to see the shell isotopes telling us something about what was happening in the bottom waters, and the mud isotopes to tell us about the surface.</p>

<p>Here's what we found in the sedimentary record about 2,900 yrs ago:<br />
1.  Shells -- higher ratios of heavy Carbon (Carbon-13) to light Carbon (Carbon-12) (a "positive" trend), and higher ratios of heavy Oxygen (Oxygen-18) to light Oxygen (Oxygen-16).<br />
2.  Mud -- slight increase in Carbon 13/12 ratios, and lower ratios of Oxygen 18/16 (a "negative" trend).  </p>

<p>What does it mean?  </p>

<p>If you're not a geologist you're probably tired of reading this stuff by now, so I'll make is short and sweet as possible.  Heavier Carbon isotopic compositions usually mean that there's a lot of photosynthesis going on -- lots of little phytoplankton sucking up the light isotope, leaving the heavy isotope behind in the water.  So we have conclusion 1:  lots of primary productivity.</p>

<p>Interpreting the oxygen is a bit trickier (hold on to your hats) ... when calcite precipitates out of water, it likes to use the light oxygen isotope, and tends to leave the heavy stuff behind.  Evaporation (as we already talked about) also preferentially removes light oxygen, which also makes remaining water isotopically heavier.  Nice story, does it fit?  Yes!  We see lighter oxygen ratios in the precipitated calcite (the mud) and heavier oxygen ratios in the shells (which reflect the composition of the water).  </p>

<p>So climate was warmer, lake levels were lower, there was lots of calcite precipitation and lots of primary productivity.  </p>

<p>Not a bad story, for a pile of mud.</p>]]></content:encoded>
	  
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      <title>Why Lake Erie is special</title>
      <link>http://blog.case.edu/katherine.allen/2006/04/20/why_lake_erie_is_special</link>
      <description>Lake Erie is by far the shallowest Great Lake: only 15 meters deep in the western basin, 20 meters in...</description>
      <guid>http://blog.case.edu/katherine.allen/2006/04/20/why_lake_erie_is_special</guid>
      
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	  <pubDate>Thu, 20 Apr 2006 20:49:28 EST</pubDate>
      <content:encoded><![CDATA[<p>Lake Erie is by far the shallowest Great Lake: only 15 meters deep in the western basin, 20 meters in the central basin, and 64 in the eastern basin, as compared to the others, which are hundreds of meters deep.  This means that Lake Erie is much more sensitive to changes -- like the littlest sibling who over-reacts to everything.  </p>

<p>I think Lake Erie's shallow basins and resulting sensitivity are the reason that its sedimentary record (ie, mud) is different than those from other lakes in the region.  We see whiting deposits (lots of fine-grained calcite) in Lake Erie and not Ontario, Huron, or the Finger Lakes because climate changes that happened in the region had a much stronger impact on Lake Erie than the others.  Certain conditions are necessary for calcite precipitation (also called "whiting events" or "whitings"), and Erie was simply pushed over the edge, while the other lakes were more stable.  </p>

<p>So where is this edge?  How do we define it?  And what pushed Lake Erie over this threshhold, inducing calcite precipitation?  There are two possible interpretations.</p>

<p>CLIMATE<br />
Warmer temperatures (jet stream shift?)increased water temperature, thus increasing CaCO3 saturation (ie, the point where water just can't hold any more dissolved ions).</p>

<p>LAKE LEVELS<br />
The outlet sill eroded, lowering lake level, which increased Ca++ weathering from the shoreline, which increased CaCO3 saturation.</p>

<p>I like the climate explanation better, because I think temperature is the primary control on whitings, and lake level drops can't account for the degree of warming that is indicated by the other sediment properties.  I also like the warm climate explanation because it is consistent with the increase in primary productivity (ie, more little green floaty organisms living, photosynthesizing, and dying) indicated by our stable isotopes.  And finally (the icing on the cake), there have been several studies linking cyanobacteria abundance and whitings -- more cyanobacteria means more whitings (as described in previous entry).  Altogether this seems to be a stronger interpretation, with lots of proxy data fitting together like puzzle pieces.  </p>

<p>Of course I could be wrong. Before I officially root for this interpretation in my final paper (and in the article that we will hopefully publish!) I'm going to try to see if it's possible to quantitatively analyze how much a temperature change would have impacted cyanobacteria, and calcite solubility.  In science, a self-consistent interpretation is good, but a self-consistent interpretation with numbers backing it up is better ...</p>

<p>Regardless of what caused these whiting events, the fact remains:  Lake Erie contains an extensive carbonate record that is absent in all the other lakes in the region.  Since carbonate materials are extremely valuable for reconstructing past climates, I think these sediments will be key to understanding environmental changes in the Great Lakes/New York area.</p>]]></content:encoded>
	  
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      <title>Great Lakes Climate ... getting warmer?</title>
      <link>http://blog.case.edu/katherine.allen/2006/04/12/great_lakes_climate_getting_warmer</link>
      <description>I think my Lake Erie mud cores have recorded a warm/dry climate event that peaked about 3,000 years ago (see...</description>
      <guid>http://blog.case.edu/katherine.allen/2006/04/12/great_lakes_climate_getting_warmer</guid>
      
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	  <pubDate>Wed, 12 Apr 2006 20:45:02 EST</pubDate>
      <content:encoded><![CDATA[<p>I think my Lake Erie mud cores have recorded a warm/dry climate event that peaked about 3,000 years ago (see earlier entries for details).  NOW I'm trying to figure out how this might influence or fit into the bigger regional picture.  Was Lake Erie warm while other lakes were cool?  That seems odd, but that's what data from some other research papers suggests.  Here are some of my thoughts on the relationship/similarities/differences between Lake Erie and Lake Ontario.</p>

<p>McFadden's Ontario paper shows that carbonate precipitation drops and then essentially stops in the Neoglacial (the period between ~5200 to 250 years ago), and they interpret it to indicate cool/dry climate conditions.  They also see a dramatic increase in diatoms (little floaty organisms made of silica), and a dramatic (fivefold) decrease in sedimentation rates (mud building up on the lake floor) during this period.  </p>

<p>I'm not sure their data is actually documenting a cool period ... a couple ideas:</p>

<p>1)  I think biology could actually be really important here.  A study on whitings in Fayetteville Green Lake, NY (Thompson 1997) shows a really strong correlation between abundance of cyanobacteria and whiting events.  Cyanobacteria blooms, coupled with warm conditions, seems to be initiating/intensifying calcite precipitation in Fayetteville Green lake more than any other factor.  The paper talks about competition between cyanobacteria and diatoms -- says that diatoms need lots of nutrients but cyanobacteria (because of their shape/size, ability to absorb) can out-compete diatoms in oligotrophic conditions (because Green Lake is oligotrophic, cyanobacteria dominate and there are lots of whitings).  In Lake Ontario, Mullins and Halfman said there was more wind, upwelling, and thus more nutrients in the Neoglacial -- so maybe diatoms out-competed the cyanobacteria there, and thus made it much more difficult for whitings to occur?  No carbonate precipitation is associated with diatoms.  </p>

<p>2)  Maybe there were whitings, but the carbonate dissolved?  Maybe oxygen levels were higher in the lake and there was more dissolution in the sediment  Today Ontario mixes almost continuously from late fall to early spring (says McFadden).  Is there more mixing in Ontario than in Erie?  It's much deeper than Erie, so that doesn't seem quite right.  Also magnetic susceptibility drops low and stays low during the Hypsithermal in Ontario -- since magnetic susceptibility is correlated with carbonate in Erie's central and eastern basins, could low mag. sus. could be evidence that there weren't whitings in Ontario?  </p>

<p>3) Or, maybe McFadden is right, and it is a cool/dry period.  What would make Ontario cool and Erie warm at the same time?  Air masses/jet stream shifts?  </p>

<p>Too many possibilities ... don't know if I can investigate them all!  I almost wish I had more than 3 weeks of school left ... Almost.<br />
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      <title>Why should we care about lake mud? Part II</title>
      <link>http://blog.case.edu/katherine.allen/2006/04/05/why_should_we_care_about_lake_mud_part_ii</link>
      <description> The Great Lakes hold 20% of the Earth’s surface fresh water, and are important natural and economic resources for...</description>
      <guid>http://blog.case.edu/katherine.allen/2006/04/05/why_should_we_care_about_lake_mud_part_ii</guid>
      
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	  <pubDate>Wed, 05 Apr 2006 09:06:53 EST</pubDate>
      <content:encoded><![CDATA[<p><br />
The Great Lakes hold 20% of the Earth’s surface fresh water, and are important natural and economic resources for the US and Canada.  During the past several thousand years they have been strongly influenced by climate change and the evolving glacial landscape of the Great Lakes region.  Lake Erie, the shallowest, has been very sensitive to environmental changes during its Holocene evolution and also to human influences during the modern era.  </p>

<p>Lake level changes impact erosion rates; temperature shifts affect productivity and water chemistry; precipitation changes influence inflow from rivers and the Upper Great Lakes.  Understanding these relationships and predicting future trends is important to maintaining these crucial natural resources.  Also, understanding Lake Erie’s past climate is essential to predicting how the Great Lakes region will respond to both natural and human-induced climate change in the future.   </p>

<p>My senior thesis project investigates Lake Erie’s history by analyzing sediments deposited in the lake’s eastern basin during the Holocene (to about 3,500 years ago).  Since changes in the physical, biological, and chemical proxies found in these lake sediments can be influenced by a variety of factors, clear identification of the primary factor or factors acting at the time of deposition is not always possible.  However, good interpretations can be made based on a critical analysis of the combined data.  In these Lake Erie sediments, we use a variety of proxies, looking at relationships between them to better understand the lake’s paleo-depositional environment. </p>

<p>How do we know when proxy changes happen? (Or, how do we date mud?)</p>

<p>Cores can be correlated by matching magnetic susceptibility peaks that appear in sediment across the central and eastern basins.  Radiocarbon dates from above the magnetic susceptibility shift are out of stratigraphic order, indicating contamination or sediment re-working.  An approximate age for the shift in our Station 23 sediment was estimated from 2900 14C yrs BP from immediately above and below the shift.</p>

<p>CONCLUSIONS (so far)</p>

<p>Multi-proxy data from a Lake Erie sediment core indicate a warm climate event, peaking at about 2900 14C years BP, followed by a period of greater climate variability.</p>

<p>Lake Erie’s climate record differs from New York lake records, potentially indicating high regional variability.</p>

<p>Understanding the response of Lake Erie to climate change is crucial to predicting and preparing for future changes.  Because it has such a shallow basin, Lake Erie’s water levels are particularly sensitive to climate.  As we continue to see shifts in regional and global temperatures, and as human impact on the Great Lakes increases, we need to prepare for major environmental consequences.  </p>

<p>Lake level fluctuations will impact coastal wetlands, commercial shipping, pleasure boating, and beach erosion.  Temperature and water chemistry changes will impact primary productivity, fisheries, and invasive organisms.   Further high-resolution paleo-climate work needs to be done in order to address these concerns.</p>

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      <title>Why should we care about lake mud?</title>
      <link>http://blog.case.edu/katherine.allen/2006/03/29/why_should_we_care_about_lake_mud</link>
      <description>Some thoughts on my Lake Tanganyika research project: The sediment deposited in Lake Tanganyika’s basin over the past several million...</description>
      <guid>http://blog.case.edu/katherine.allen/2006/03/29/why_should_we_care_about_lake_mud</guid>
      
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	  <pubDate>Wed, 29 Mar 2006 22:03:25 EST</pubDate>
      <content:encoded><![CDATA[<p>Some thoughts on my Lake Tanganyika research project:</p>

<p>The sediment deposited in Lake Tanganyika’s basin over the past several million years is largely composed of organic matter (Hartwell et al, 2002).  Decaying algal remains, zooplankton excretions, and land-derived material all contribute to organic matter deposited in lakes, but the primary source is often phytoplankton biomass (Wetzel, 1975).  Several physical and climatic factors influence the production, transport, deposition, and preservation of this organic matter, including:  the degree of lake stratification, water temperature, oxygen levels, nutrient supply, and seasonal wind patterns.  Understanding and quantifying these various influences in recent Lake Tanganyika sediment is important to paleoclimate studies, which attempt to reconstruct past environmental conditions based on the type and amount of organic matter present in ancient sediment.  If we can better understand the factors determining sediment composition today, then we will be better able to understand regional and global climate changes recorded in the lake’s ~10 million year record.  </p>

<p>Previous work has found that organic matter is a good paleo-indicator of depth, because it decreases with depth and has an almost inverse relationship to the amount of dissolved oxygen in the water (Jiminez, 2005).  It is soluble in oxygenated water, so will tend to dissolve in shallow waters and will accumulate at higher rates as depth increases and oxygen levels decrease.  Its presence or absence could help reconstruct paleo-oxycline levels.  </p>

<p>However, the use of this proxy can be difficult because lakebed morphology also has a strong influence on organic matter abundances.  In some places in Lake Tanganyika, terrestrial input is greater on sloped areas, which dilutes the organic matter (Hartwell et al, 2002).  A quantitative understanding of slope on this proxy would be very useful.  </p>

<p>Another difficulty with using organic matter as a paleoclimate proxy is that it also depends on seasonal winds and lake mixing depths.  Oxygen levels do not decrease uniformly throughout the lake, but vary seasonally and with location.  During the dry season, winds force surface currents northward; one model predicts that this will cause upwelling and high productivity in the southern part of the lake, which would lead to greater organic matter deposition.  However, mixing reaches deeper in the southern lake and is predicted to cause high levels of organic matter dissolution (Tsuchida et al, 2002).  Thus, factors such as seasonal winds and varying oxygen levels will also have to be taken into account when trying to understand the balance between productivity and preservation.  </p>

<p>As climate is emerging as a major concern for the global community, studies such as this which enable high-resolution paleoclimate reconstruction are crucial.  Lake Tanganyika contains an excellent record of past environmental changes, and could provide important information about the mechanisms of change on both regional and global scales. <br />
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      <title>Stories out of Mud</title>
      <link>http://blog.case.edu/katherine.allen/2006/03/28/stories_out_of_mud</link>
      <description>I think the big shifts in my sediment core data are recording a climate signal. Here&apos;s why: Between 1100 -...</description>
      <guid>http://blog.case.edu/katherine.allen/2006/03/28/stories_out_of_mud</guid>
      
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	  <pubDate>Tue, 28 Mar 2006 22:50:31 EST</pubDate>
      <content:encoded><![CDATA[<p>I think the big shifts in my sediment core data are recording a climate signal.   </p>

<p>Here's why:</p>

<p>Between 1100 - 600 cm depth (roughly 3,000 years ago) there is a large increase in magnetic susceptibility, total inorganic carbon, % fine-grained material, and delta 13C (13 Carbon isotope).  When water temperatures increase, CaCO3 becomes less soluble (in other words, it likes to be in colder water, and starts to "rain" out when temperatures increase).  I think that air temperatures increased around 3k years ago, causing CaCO3 to precipitate out of the lake water -- an event called a "whiting."  Sediments from whitings tend to be very fine-grained (consistent with my grainsize data) and can contain iron (in the form of siderite, an iron-carbonate).  </p>

<p>Previous work supports this idea (which doesn't necessarily mean it's right, but is encouraging).  Mudroch (1982) found that fine-grained, carbonate-rich sediments in a core from Lake Erie's central basin contained mollusc species that lived in much warmer waters (15-23 degrees C) than those found in coarser, low-carbonate sections (4-12 degrees C).</p>

<p>Graham and Rea (1980) also saw a sudden increase in fine-grained carbonate-rich sediments at roughly the same time, indicating that this is a regional rather than a basin-specific signal/event (points to climate).  </p>

<p>I still have a lot of questions.  Why does our % water decrease and then increase again with depth?  Where does the Fe come from -- is there really siderite in our sediment?  Why are there sections of the core with mostly whole, articulated mollusc shells, and other sections with shell hash?  Does it fit the story?  Why are my radiocarbon dates out of order stratigraphically?  Turbidity currents/gravity flows?  </p>]]></content:encoded>
	  
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      <title>Lake research in Tanzania</title>
      <link>http://blog.case.edu/katherine.allen/2006/03/19/lake_research_in_tanzania</link>
      <description>Nyanza Project This summer I will be doing tropical lake research on Lake Tanganyika, Tanzania. I&apos;ll be working with other...</description>
      <guid>http://blog.case.edu/katherine.allen/2006/03/19/lake_research_in_tanzania</guid>
      
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      <category domain="http://www.case.edu">Case Western Reserve University</category>
	  <pubDate>Sun, 19 Mar 2006 16:14:51 EST</pubDate>
      <content:encoded><![CDATA[<p>Nyanza Project</p>

<p>This summer I will be doing tropical lake research on Lake Tanganyika, Tanzania.  I'll be working with other students and faculty from the US and from the University of Dar es Salaam, which is located in the capital of Tanzania.  The Kigoma field station will be used by people in our research group to study things like climate change, human impact on nutrients and erosion, evolution of lacustrine organisms, and several other topics.  </p>

<p>My research project will use lake sediments to get a high-resolution record of recent climate change and environmental impacts.  Specifically, I'll be studying controls on organic matter distribution and accumulation in different areas over time, and will also evaluate organic matter's relationship to grainsize and lake-bottom morphology.  </p>

<p>To do this, I'll be measuring organic and inorganic matter abundances in cores taken in a transect roughly parallel to shore, in water about 100 m deep.  I'll analyze total organic carbon (TOC) and total inorganic carbon (TIC), do smear slide descriptions, and perform laser particle size analysis, probably using a Spectrex Laser Particle counter.  TOC will probably be determined using the loss-on-ignition (LOI) method, which can be useful, but can also give inflated organic matter concentrations if there is a lot of volatile non-carbon matter in the sediment.  </p>

<p>We'll use a multicorer (which grabs sediment samples down to about 60 cm depth) and a gravity corer, which recovers sediment to about 2 m depth.  I haven't used a multicorer or a gravity corer before, but the principles are simple:  drop a heavy tube over the side of a boat, let it hit the bottom and sink into the mud, then pull it back up.  Will have to do some more reading on specifics.  </p>]]></content:encoded>
	  
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      <title>Climate Change:  the role of Silicate weathering</title>
      <link>http://blog.case.edu/katherine.allen/2006/02/26/climate_change_the_role_of_silicate_weathering</link>
      <description>Scientific papers are often torturously technical -- square and dry as toast -- so to understand what they&apos;re trying to...</description>
      <guid>http://blog.case.edu/katherine.allen/2006/02/26/climate_change_the_role_of_silicate_weathering</guid>
      
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	  <pubDate>Sun, 26 Feb 2006 11:00:41 EST</pubDate>
      <content:encoded><![CDATA[<p>Scientific papers are often torturously technical -- square and dry as toast -- so to understand what they're trying to say I often have to translate these texts into something I can see or imagine.  </p>

<p>I have been slogging through several such papers this weekend in order to write a research proposal for my masters at Cambridge next year.  One of my more important "imagination translations" (central to the questions we will be trying to answer) is described below:</p>

<p>I am standing outside in the rain, on a rocky coast, facing the ocean.  The rocks beneath my feet are typical of Earth's crust, roughly granitic and containing lots of silica.  For kicks let's call it anorthite (for you chemists, that's CaAl2Si2O8).  I breathe out, adding some more carbon dioxide (CO2) to the air.  This atmospheric CO2 is absorbed by the grasses around me, which produce organic acids.  It is also absorbed by soil waters, although I'm not sure how, and becomes carbonic acid.  The rain pounds down and a river next to me gushes into the bay ahead, washing acid from soil and grass into the ocean.  </p>

<p>Or, if that's too artsy for you, just read the chemical equation:</p>

<p>2CO2 + 3H2O + CaAl2Si2O8 = Ca+2 + 2HCO3- + Al2Si2O5(OH)4</p>

<p>This reaction supposedly provides the feedback that regulates climate over geologic time and "maintains equable climatic conditions on Earth" (West, 2005).  I have yet to truly understand why (I know it must have to do with regulating CO2 in the atmosphere, which influences global temperatures among other things), but I'm working on it.  </p>

<p>This Si weathering feedback is not a new idea, and lots and lots of work has been done on it.  I could probably explain most of the process to you in detail if I sat down and read papers for a week.  What I may actually be working on at Cambridge has to do with improving our ability to use a relatively new proxy to understand past and present climate.  This proxy (science lingo for "data that measures something indirectly") is a ratio of elements:  Germanium and Silica (Ge and Si).  As elements, they are very similar and Ge often substitutes for Si in mineral lattice sites (which means, they're about the same size/charge and sometimes you can switch one for the other, like apples and oranges).  Ge and Si have similar cycles and distributions in the ocean, BUT there are certain forces/conditions/events that can upset their usual balance.  Like ice ages.  Previous studies have found that there is less Ge relative to Si in glacial oceans than interglacial oceans.  </p>

<p>There are lots of different examples of deviations from the "normal" ratio (defined as amounts measured in the ocean today), and lots of ideas about WHY and HOW this "fractionation" happens.  My project will probably investigate either weathering on the continent, or sedimentation on the seafloor.  I'm interested in physical/chemical weathering mechanisms and how they impact the Ge/Si ratio because once we can quantify that, we'll be better able to understand climate regulation.  I'm also interested in what happens to Ge and Si during deposition and burial, because that will help us understand the sedimentary record.  It's great if we can put together a good story for how modern cycles work, but if we want to understand the <em>past</em>, we also have to know what happens to these sediments after they're deposited.  Understanding modern cycles without knowing about post-depositional alterations is like knowing how to read but not being able to uncrumple a mashed piece of paper.</p>

<p>The oceanic sedimentary record is like a big mish-mashed encyclopedia written in a hundred different inter-connected languages all at once, with volumes stacked one on top of another for millenia.  Essentially de-coding those volumes and teasing out the stories hidden within can tell us a lot about how the Earth worked in the past and how it will work in the future.  Specifically, understanding the Ge/Si ratio might give us more insight into the role of weathering/erosion in global climate, and also help us predict how the Earth will respond to rising levels of atmospheric CO2.  </p>

<p>To be honest, I'm pretty excited about it, although I still need to do a lot of work (and read a lot of toasty-dry papers) before I can put together a research plan.  </p>]]></content:encoded>
	  
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      <title>Through the Mud ...</title>
      <link>http://blog.case.edu/katherine.allen/2006/02/13/through_the_mud</link>
      <description>I have worked for about 5 months to pull information out of my Lake Erie sediment cores so carefully, methodically;...</description>
      <guid>http://blog.case.edu/katherine.allen/2006/02/13/through_the_mud</guid>
      
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	  <pubDate>Mon, 13 Feb 2006 23:31:57 EST</pubDate>
      <content:encoded><![CDATA[<p>I have worked for about 5 months to pull information out of my Lake Erie sediment cores so carefully, methodically; now I am sitting here with a huge pile of data and I don't know what to do with it.  I feel like a squirrel that's just worked its tail off gathering acorns and has just discovered that the whole pile won't fit in its cheeks at once.  Maybe that's not the greatest analogy for it, but I've been studying Geology for the past 4 years, not English, so maybe I can get away with it.</p>

<p>In any case, I am trying to make sense of my data, alternating between analyzing little bite-sized pieces and stepping back, blurring my vision a bit, to get a feel for the ever-elusive "big picture."  I've got a smorgasboard of data to mix and match:  grainsize, magnetic susceptibility, water content, biogenic silica, carbonate content, stable isotopes, radiocarbon dates, ostracodes, fingernail clams, and diatoms ... </p>

<p>The biggest problem with paleoclimate reconstruction (essentially, trying to predict the past) is that even if you find a beautiful, clearly-defined trend in your data, you can't be quite sure what it means.  There are several factors that influence a certain proxy in a certain way, and so at first you can't tell whether it was Influence A or Influence B or a combination of the two.  Or a completely new and never-before-thought-of Influence C.  </p>

<p>Interpretation of isotopes is particularly tricky for me at the moment.  Not just because the relative influences on this proxy are hard to understand, but also because the literature (meaning, scientific papers written by other people all over the world on this topic) actually contradicts itself.  Whom to believe?  Now I have to go deep -- actually delve into methods, data tables, and other snarly details -- and decide who I think is right!  Or come up with my own ideas ... what a thought ...</p>

<p>I suppose I should be excited about this, because that is exactly what science is all about!  It's a little frustrating, all the same.</p>]]></content:encoded>
	  
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      <title>Untangling my thoughts ...</title>
      <link>http://blog.case.edu/katherine.allen/2006/01/31/untangling_my_thoughts</link>
      <description>I need to be clearer about my goals. Long-term: 1. I want to pursue scientific research in graduate school. Broadly,...</description>
      <guid>http://blog.case.edu/katherine.allen/2006/01/31/untangling_my_thoughts</guid>
      
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	  <pubDate>Tue, 31 Jan 2006 18:16:44 EST</pubDate>
      <content:encoded><![CDATA[<p>I need to be clearer about my goals.  </p>

<p>Long-term:</p>

<p>1.  I want to pursue scientific research in graduate school.  Broadly, to investigate how the Earth works: how oceans, atmosphere, and land interact.  </p>

<p>2.  I want my work to have a positive impact on the human relationship with the environment.</p>

<p>3.  I would rather be a scientist with the power to influence environmental policy than a lawyer or a politician.</p>

<p>4.  I am interested in human influences on nature, but I also believe that understanding the Earth's history (pre-humans) is crucial to understanding what is happening now, and to predicting what will happen in the future (in terms of climate change).  </p>

<p>Short-term:</p>

<p>1.  I want to choose a program at Cambridge for next year that will best fulfill my needs/interests.  </p>

<p>2.  I need to choose an advisor and a research project that will help me develop technical skills and gain a better understanding of paleoclimate and environmental research methods.  </p>

<p>Right now, I am leaning towards a project that explores the Ge/Si ratio in continental runoff (rivers and groundwater) and in ocean water/sediments as a proxy for continental weathering.  In other words, the goal of the project is to find out if this ratio depends on the break-down of rocks, physically and chemically.  Another aspect of the work is to find out how plants affect weathering, and if there is an isotopic "fingerprint" that we can learn to recognize as a plant signal.  If this is true, then we can "go back in time" by studying ancient sediments and their chemical composition.  If we find a certain ratio of Ge/Se, and likewise if we can find that "fingerprint," then (hopefully) we could say something about how much the continents were weathering at certain times in the Earth's history.  And also explain WHY (which is a big thing for most geologists ... they <em>why</em> of everything).  </p>

<p>This work would be important because continental weathering rates strongly affect the amount of CO2 (carbon dioxide) in the atmosphere, which affects global temperature.  If we can figure out what was happening in the past, then we have a better chance of understanding how the Earth's climate is changing now, and how it will continue to change in the future.  </p>]]></content:encoded>
	  
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      <link>http://blog.case.edu/katherine.allen/2006/01/31/6320</link>
      <description>Today&apos;s dilemma: Do I want my future research/career to have a human component? Specifically, should I do an MPhil in...</description>
      <guid>http://blog.case.edu/katherine.allen/2006/01/31/6320</guid>
      
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	  <pubDate>Tue, 31 Jan 2006 14:15:22 EST</pubDate>
      <content:encoded><![CDATA[<p>Today's dilemma:  Do I want my future research/career to have a human component?  Specifically, should I do an MPhil in Quaternary Science or an MPhil by research thesis at Cambridge?</p>

<p>Do I want to study the Earth, <em>just</em> the Earth, and work on things like paleoclimate reconstruction?  Understanding the Earth system ... past, present, and perhaps future?</p>

<p>Or, do I want my work to bridge the divide between science and policy?  To include the human factor in the equation, and do work that has a more direct impact on people's relationship with the environment?</p>

<p>In short, do I want to go the hard-core science track or the more political environmental policy track?  Can I do both?</p>

<p>I've just been offered a full scholarship to Cambridge University next year.  For the past few days I have been absolutely over the moon with happiness (although the scholarship doesn't mean I am officially admitted to the University yet ... it's a confusing proecess).  I applied for an MPhil in Quaternary Science (like a masters degree) in the Geography department, but the Cambridge professors I have been emailing with are encouraging me to switch to the MPhil by Research thesis option, offered in the Earth Sciences department.  </p>

<p>I have a technical, scientific background, and already have some experience with research.  One prof suggested to me that the QS courses would be a review for me, and that working on a research thesis would teach me much more.  </p>

<p>I'm torn.</p>

<p>On one hand, I love working on my senior thesis project.  I learn more figuring things out in my lab and talking with my advisor than I do in class.  I think doing a more intense research project at Cambridge would give me lots of great technical skills and experience ... maybe even produce a paper.  On the other hand, I want to take advantage of the classes they offer, to learn about Quaternary Science from a different point of view (that of a geographer's?), to interact with more students, etc.  Some profs I've talked to think that geography is "touchy-feely" ... but I think that the human factor is crucial to any modern climate/environmental work, and is fascinating in its own right.  It all comes down to:  do I want to spend time in the Earth Sciences dept. or the Geography dept.?  I don't know much about how they are different at Cambridge, so now I am trying to do some research ... to find out what kinds of papers they are publishing, and figuring out which is a better fit for me.  The problem is ... to figure out where is best for me, I need to know what my goals are.  </p>

<p>More to come on this later ...</p>]]></content:encoded>
	  
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      <link>http://blog.case.edu/katherine.allen/2006/01/22/6199</link>
      <description>Welcome to Ramblings of a Geologist. Here, I will ... 1) Write about my senior project analyzing Lake Erie sediments,...</description>
      <guid>http://blog.case.edu/katherine.allen/2006/01/22/6199</guid>
      
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	  <pubDate>Sun, 22 Jan 2006 09:58:32 EST</pubDate>
      <content:encoded><![CDATA[<p>Welcome to Ramblings of a Geologist.  Here, I will ...</p>

<p>1) Write about my senior project analyzing Lake Erie sediments, which will hopefully clarify my thoughts.  Lake Erie's history is fascinating but not well-understood.  Even people who have been studying it their whole careers aren't sure what's going on.  </p>

<p>2) Figure out a good research project to do while I'm working on Lake Tanganyika (Tanzania) this summer.  I'll be there for 7 weeks, living in a field station with American and African students.</p>

<p>3) Explore potential subjects that I might specialize in during graduate school.  I've applied to several oceanography/lake studies programs, and will soon have to choose a more specific research path.  </p>

<p>I will also throw in some thoughts on science and nature and other subjects that will inevitably come up as I go.  </p>]]></content:encoded>
	  
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